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Robin Nunkesser


Address: Informatik 2, TU Dortmund, Otto-Hahn-Straße 14
44221 Dortmund, Germany
Office: Otto-Hahn-Straße 14, room 333 
E-mail: Robin.Nunkessertu-dortmund.de
Phone: +49 231-755-5132
Fax: +49 231-755-2047 
Photo

Research Interests: Efficient Algorithms, Statistical Problems, Computational Geometry, Graph Representation


Software

RFrEAK is an extension of FrEAK for problems in computational statistics and interaction with R. 
It adds a search spaces called "boolean functions" and "subsets of points" to FrEAK which work in the same way as other search spaces described in the user's guide below. In addition there is a button named "Quick Start GPAS" (Genetic Programming for Association Studies) which allows quicker access to the facilities of the new search space.
The interface to R is realized in an R package.

R Package RFreak

Available on CRAN.

Stand-alone RFrEAK 0.2

R Package rPorta

Available on CRAN.

Publications

  • Robin Nunkesser. RFreak - An R Package for Evolutionary Computation. Technical Report 12/2008, SFB 475, TU Dortmund, Germany.
    [Technical Report]
     
  • Oliver Morell, Thorsten Bernholt, Roland Fried, Joachim Kunert, and Robin Nunkesser. An Evolutionary Algorithm for LTS-Regression: A Comparative Study. Compstat 2008. Accepted.
     
  • Robin Nunkesser. Analysis of a Genetic Programming Algorithm for Association Studies. Proceedings of GECCO 2008. ACM, 1259-1266, 2008.
    [DOI link]   [talk]
     
  • Robin Nunkesser and Philipp Woelfel. Representation of Graphs by OBDDs. Discrete Applied Mathematics. Accepted.
    Conference version: ISAAC 2005.
    [DOI link]  [Conference Version]  [talk]
     
  • Robin Nunkesser, Roland Fried, Karen Schettlinger, and Ursula Gather. Online Analysis of Time Series by the Qn Estimator. Computational Statistics & Data Analysis. Accepted.
    [DOI link]
     
  • Robin Nunkesser, Karen Schettlinger, and Roland Fried. Applying the Qn Estimator Online. In: Preisach, C., Burkhardt, H., Schmidt-Thieme, L., and Decker, R. (Eds.) Data Analysis, Machine Learning and Applications (Proceedings of GfKl 2007). Springer, 277-284, 2008.
    [DOI link]   [abstract]   [talk]
     
  • Robin Nunkesser, Thorsten Bernholt, Holger Schwender, Katja Ickstadt, and Ingo Wegener. Detecting High-Order Interactions of Single Nucleotide Polymorphisms Using Genetic Programming. Bioinformatics, 23(24):3280-3288, 2007.
    Preliminary Version: Technical Report 24/2007, SFB 475, Universität Dortmund, Germany.
    [abstract]   [article]   [Technical Report]
     
  • Thorsten Bernholt, Robin Nunkesser, and Karen Schettlinger. Computing the Least Quartile Difference Estimator in the Plane. Computational Statistics & Data Analysis, 52(2):763-772, 2007.
    Preliminary Version: Technical Report 51/2005, SFB 475, Universität Dortmund, Germany.
    [DOI link]   [Technical Report]
     

Talks and Poster Presentations

  • Robin Nunkesser. A Genetic Programming Algorithm for Association Studies. Compstat 2008.
    [abstract] [talk]
     
  • Robin Nunkesser, Silke Straatmann, and Simone Wenzel. rPorta - An R Package for Analyzing Polytopes and Polyhedra. UseR! 2008.
    [abstract] [talk]
     
  • Robin Nunkesser. Evolutionary Algorithms for Robust Methods. ERCIM and CFE 2008.
    [talk]
     
  • Robin Nunkesser. RFreak - An R Package for Evolutionary Computation. Statistical Computing 2008.
    [abstract] [talk]
     
  • Robin Nunkesser Genetic Programming for Association Studies. Seminar talk at the Institut für Medizinische Biometrie, Informatik und Epidemiologie Bonn.
    [talk]
     
  • Robin Nunkesser, Thorsten Bernholt, Oliver Morell, and Holger Schwender. Evolutionary Computation for Problems in Computational Statistics. Statistical Computing 2007.
    [abstract] [talk]
     
  • Robin Nunkesser, Karen Schettlinger, Roland Fried, and Ursula Gather. Online Analysis of Time Series by the Qn Estimator. ERCIM WG and CFE 2007.
    [abstract] [talk]
     
  • Oliver Morell, Thorsten Bernholt, Roland Fried, Joachim Kunert, and Robin Nunkesser. An Evolutionary Algorithm for LTS-Regression: A Comparative Study. DAGStat Tagung 2007.
    [abstract] [poster]
     
  • Thorsten Bernholt, Robin Nunkesser, and Karen Schettlinger. New Algorithms for Least Quartile Difference Regression. Compstat 2006.
    [abstract] [talk]
     
  • Thorsten Bernholt and Robin Nunkesser. Fast Algorithms for Robust Regression. Statistical Computing 2006.
    [abstract] [talk]
     
  • Katja Ickstadt, Thorsten Bernholt, Arno Fritsch, Robin Nunkesser, Holger Schwender, and Roland Fried. MCMC or Genetic Programming? Comparing Search Algorithms for the Analysis of Genotype Data. ISBA 2006.
    [poster]
     

Theses

  • Robin Nunkesser. Zur impliziten Darstellung von Graphen durch OBDDs.
    Diploma Thesis, University of Dortmund (2004). In German.
    [ps]  [pdf]  [BibTeX]  [slides]  [slides (new)]
     


 Last modified: 14th October 2008